Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889667.1_cds_XP_016444379.1_39446
CDS Infomation

[gene=LOC107769656] [db_xref=GeneID:107769656] [protein=DEAD-box ATP-dependent RNA helicase 21] [protein_id=XP_016444379.1] [location=11780..13915] [gbkey=CDS]
Sequence

ATGAGTCGATCAGTTGACGACAGCGGAACCAAGCCAGATCCGTCAAAGAAGCCTGTCTTC
CTTACTAAAGCACAGCGAGAGGAGTTAGCCCTTAAGCGCCGCCACGAAGAAATCGCCGAG
CAGAAACGGCGGTCCGAACAGCTTCTCCAAGAACAAGGTAACAACCGCCCTTCCTCTACT
GACAACGACCGTGACCATGACCGGGATCCTCGTGAGAGAGATAGGGATAGGGATAGAGGG
GACCACCATCGCTCCAGAGACCGTGACAGAGAAAGAGACAGAGAAAGGGAGTCGAGGGAC
CGTGATAGGGAGGCGGAGCGTCGGAAGCGGGAGAGGGATCGTGACGAAGAGCTAAAAGAA
CGAGAGCGAGCTCGATTGGAGAAACTAGCAGAACGAGAGCGAGAGAAGGAGCTTGATGCC
ATTAAAGAGCAGTATCTGGGCTCTAAAAAACCTAAGAAGCGGGTGATTAAGCCCAGTGAG
AAATTCCGATTCTCCTTCGACTGGGAGAACACGGAGGACACATCACGTGACATGAACGCT
CTCTACCAAAACCCTCATGAAGCCCGCTTGCTCTTTGGTCGCGGATTTCGTGCTGGAATG
GATAGAAGGGAGCAGAAGAAGCTTGCTGCTAAGAATGAACGGGAGCTCCGTGAGGAGATT
CGCAAGAAGGACGGAATCGAAGAGTCTGCTATTGAAGCAGCTGCTTTAAAGAAGAAGGAA
CTAGATGCTGATATGTATGATACTTTCGACATGAGGGTTGACCGTCATTGGTCGGATAAG
AAGCTGGAGGAGATGACGGAGAGAGATTGGAGAATATTCAGGGAGGATCATAATATATCC
TATAAGGGGTCGAGGATACCCCGGCCCATGAGGAATTGGGCTGAGAGCAAGTTAACTACC
GAGTTGCTCAAGGCCGTTGAGAGGGCTGGCTACAAGAAGCCTTCTCCTATTCAAATGGCT
GCAATTCCGCTTGGACTTCAACAGCGTGATGTGATTGGCGTGGCAGAGACTGGTTCAGGT
AAAACTGCTGCTTTTGTTCTCCCTATGTTGACTTATATCACTAGGCTTCCTCCGTTGAGC
GAGGAGAATGAGGCGGAGGGTCCATATGCTGTTGTGATGGCACCTACCCGAGAATTGGCT
CAACAGATTGAGGATGAGACAGTTAAGTTTGCGCACTATTTGGGTATAAAAGTTGTTTCT
ATTGTTGGTGGGCAGTCCATTGAGGAGCAAGGTTTTAGGATTAGGCAGGGTTGTGAAGTT
GTGATTGCAACCCCTGGACGACTTCTTGATTGCTTGGAGAGGCGTTATTGTGTACTGAAC
CAGTGTAATTATATTGTTCTTGATGAGGCTGATCGAATGATTGACATGGGTTTTGAACCT
CAAGTTGTCGGTGTACTGGATGCTATGCCTTCGAGTAATATGAAACCAGAGAATGAGGAT
GAAGAGCTTGACGAGAAGAGGATTTATCGAACCACTTATATGTTCAGTGCTACTATGCCA
CCTGCTGTAGAGCGGCTGGCTAGAAAATACTTGAGAAATCCTGTTGTCGTGACTATTGGC
ACTGCTGGAAAGACTACTGACCTCATTACTCAGCACGTGTTCATGGTTAAGGAATCCGAG
AAAATGTATAAGCTGCAGAAATTGCTGGATGAGCTTGGAGATAAGACGGCTATCGTGTTC
ATCAACACTAAGAAGCAGGCTGATACTGTTGCCAAGAATCTGGATAAAAACGGCTACAGG
GTAACCACACTGCATGGTGGAAAGTCACAGGATCAAAGAGAAATCAGCCTTGAAGGATTT
AGGACAAAGAGGTATAATGTGTTAGTTGCTACTGATGTTGCTGGTCGTGGGATTGATATA
CCTGATGTGGCCCATGTGATAAACTATGATATGCCAAACAATATTGAAGCATACACCCAT
CGTATTGGACGAACAGGTCGTGCTGGAAAGACTGGTGTAGCCACAACATTCTTGACCATG
CAGGATACTGAAGTCTTTTACGATCTTAAGCAAATGCTCACTCAAAGCAACAGTCCGGTC
CCCCCTGAACTTGCCCGGCATGAGGCTTCGAAGTTCAAGCCAGGAAGTATACCCGACAGA
CCACCTAGGCGGCAGGAAACTTTATTTACTCATTAA

Peptide Sequence

PEP ID

XP_016444379.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Nicotiana tabacum]
Sequence

MSRSVDDSGTKPDPSKKPVFLTKAQREELALKRRHEEIAEQKRRSEQLLQEQGNNRPSST
DNDRDHDRDPRERDRDRDRGDHHRSRDRDRERDRERESRDRDREAERRKRERDRDEELKE
RERARLEKLAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNA
LYQNPHEARLLFGRGFRAGMDRREQKKLAAKNERELREEIRKKDGIEESAIEAAALKKKE
LDADMYDTFDMRVDRHWSDKKLEEMTERDWRIFREDHNISYKGSRIPRPMRNWAESKLTT
ELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLTYITRLPPLS
EENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEV
VIATPGRLLDCLERRYCVLNQCNYIVLDEADRMIDMGFEPQVVGVLDAMPSSNMKPENED
EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKTTDLITQHVFMVKESE
KMYKLQKLLDELGDKTAIVFINTKKQADTVAKNLDKNGYRVTTLHGGKSQDQREISLEGF
RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPNNIEAYTHRIGRTGRAGKTGVATTFLTM
QDTEVFYDLKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRQETLFTH

Transcript Sequence

Gene sequence data has not been registered.